SELECTED PUBLICATIONS

Protocol to profile the bioenergetics of organoids using Seahorse. M.C. Ludikhuize, M. Meerlo, B.M.T. Burgering and M.J. Rodríguez Colman. STAR PROTOCOLS | MARCH 19, 2021. Open Access • DOI: 10.1016/j.xpro.2021.100386

Mitochondria define intestinal stem cell differentiation downstream of a FOXO/Notch axis. M.C. Ludikhuize, M. Meerlo, M. Pages Gallego, M. Burgaya Julià, N.T.B. Nguyen, E. C. Brombacher, J.H. Paik, B.M. T. Burgering, M.J. Rodríguez Colman. Cell Metabolism. Volume 32, Issue 5, 3 November 2020, Pages 889-900.e7. https://doi.org/10.1016/j.cmet.2020.10.005

Metabolic Regulation of Stem Cells and Differentiation: A Forkhead Box O Transcription Factor Perspective. Marlies Corine Ludikhuize and María José Rodríguez Colman. Antioxidants & Redox Signaling. Vol. 34, No. 13, Metabolic Redox-Switches and Moonlighting Proteins. 7 Apr 2021 https://doi.org/10.1089/ars.2020.8126

Interplay between metabolic identities in the intestinal crypt supports stem cell function. Rodríguez-Colman MJ, Schewe M, Meerlo M, Stigter E, Gerrits J, Pras-Raves M, Sacchetti A, Hornsveld M, Oost KC, Snippert HJ, Verhoeven-Duif N, Fodde R, Burgering BM. Nature. 2017 Mar 16;543(7645):424-427. doi: 10.1038/nature21673. Epub 2017 Mar 8. https://www.nature.com/articles/nature2167

FOXOs support the metabolic requirements of normal and tumor cells by promoting IDH1 expression. Charitou P*, Rodriguez-Colman M*, Gerrits J, van Triest M, Groot Koerkamp M, Hornsveld M, Holstege F, Verhoeven-Duif NM, Burgering BM. EMBO Rep. 2015 Apr;16(4):456-66. doi: 10.15252/embr.201439096. Epub 2015 Feb 3. *Shared first authorship. https://www.embopress.org/doi/full/10.15252/embr.201439096

With collaborators

Global analysis of protein arginine methylation. Fangrong Zhang, Jakob Kerbl-Knapp, Maria J. Rodriguez Colman, …, Tobias Madl. Cell Reports Methods. 2021 Jun Vol 1, Issue 2, 100016. https://doi.org/10.1016/j.crmeth.2021.100016

Integrative multi-omics analysis of intestinal organoid differentiation. Lindeboom RG, van Voorthuijsen L, Oost KC, Rodríguez-Colman MJ, Luna-Velez MV, Furlan C, Baraille F, Jansen PW, Ribeiro A, Burgering BM, Snippert HJ, Vermeulen M. Mol Syst Biol. 2018 Jun 26;14(6):e8227. doi: 10.15252/msb.20188227. https://www.embopress.org/doi/full/10.15252/msb.20188227

Specific Labeling of Stem Cell Activity in Human Colorectal Organoids Using an ASCL2-Responsive Minigene. Oost KC, van Voorthuijsen L, Fumagalli A, Lindeboom RGH, Sprangers J, Omerzu M, Rodriguez-Colman MJ, Heinz MC, Verlaan-Klink I, Maurice MM, Burgering BMT, van Rheenen J, Vermeulen M, Snippert HJG. Cell Rep. 2018 Feb 6;22(6):1600-1614. https://pubmed.ncbi.nlm.nih.gov/29425513/

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